PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zosma114g00360.1
Common NameZOSMA_114G00360
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
Family bHLH
Protein Properties Length: 234aa    MW: 26082 Da    PI: 6.3624
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zosma114g00360.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.11.7e-09123171355
                       HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        +h+ +Er RR++i +++  L+ l+P +    +k   Ka +L + ++Y++sLq
  Zosma114g00360.1 123 NSHSLAERLRREKISERMRFLQNLVPGC----NKITGKAVMLDEIINYVQSLQ 171
                       58**************************....999*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000832.11E-10118175No hitNo description
SuperFamilySSF474592.22E-17118190IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.161120170IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.108.9E-17120189IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000109.4E-7123171IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.7E-8126176IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    Send to blast
MARTFSDLSS DGAASINPPT PMVSRQFSFN HLDLQNAASY DVGFLDYITS YSVSEVGGAS  60
SAIANSDDDG RDFGGRKRKK NLDFFQNHSN KKEAKLREPQ TMENSSSKEE YIHMRAKRGQ  120
ATNSHSLAER LRREKISERM RFLQNLVPGC NKITGKAVML DEIINYVQSL QSQVEFLSMK  180
LSTVNPEPNQ MLTNDIVVQT SLGSNPDHLN YGIIAQNYGS SLWDDDLQNV VFS*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17579RKRKK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010939355.15e-50PREDICTED: transcription factor bHLH74-like isoform X5
SwissprotQ6NKN97e-47BH074_ARATH; Transcription factor bHLH74
TrEMBLA0A0K9Q2L41e-175A0A0K9Q2L4_Z
STRINGPGSC0003DMT4000048304e-46(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP60333650
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10120.15e-48bHLH family protein